SRX14255715
GSM5911405: MCF-7 ER Treatment; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
ESR1

Cell type

Cell type Class
Breast
Cell type
MCF-7
Primary Tissue
Breast
Site of Extraction
Pleura
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
MCF-7 cells
cell line
MCF-7 cells
treatment
XMU-MP-1
antibody
ER

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Qiagen PCR kit KAPA Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
15230872
Reads aligned (%)
100.0
Duplicates removed (%)
0.0
Number of peaks
1552 (qval < 1E-05)

hg19

Number of total reads
15230872
Reads aligned (%)
100.0
Duplicates removed (%)
0.0
Number of peaks
1620 (qval < 1E-05)

Base call quality data from DBCLS SRA